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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015951500.1_cds_XP_016491494.1_81803
CDS Infomation

[gene=LOC107811134] [db_xref=GeneID:107811134] [protein=RHOMBOID-like protein 1 isoform X2] [protein_id=XP_016491494.1] [location=join(38776..39089,41197..41360,43548..43711,43837..44096,44769..44895,44992..45069)] [gbkey=CDS]
Sequence

ATGGCCGGAAGTGTACCGGAGATCCAAATCCAGGTCAATTCAAAGAAAGGGGGTAACTCA
ATACACCCAGTAGAGCCAGCGAGAACATCAGCAGGAGGAGGACCACCTGTTGTTTATAGA
GAAATTAAGCATTTCAAGAAATGGTTTCCATGGTTAATACCATCTTTTGTTATAGCCAAT
GTGGTGACTTTTTTAGTAACCATGTATGTTAATAACTGCCCCCACAACTCTGTTTCTTGT
GTTGCTGGATTCTTGGGTAGGTTTTCCTTTCAGCCTTTCAGTGAAAATCCTCTTCTTGGG
CCTTCTTCTAACACACTAGAGAAGATGGGTGCTTTAGACGTGAATAAGGTGGTCCACGAA
CATGAAGGGTGGCGCCTTATTACTTGCATGTGGTTGCACGGTGGAGTTTTTCATTTACTG
GCCAACATGCTGAGTCTGATAGTCATTGGCATTCGGCTGGAGCGAGAGTTTGGATTTGTA
CGCATTGGCCTGCTCTATATCATTGCGGGACTTGGTGGCAGCTTGTTCTCAGCTCTATTT
ATTAAGTCAAATATATCTGTCGGTGCTTCTGGTGCACTTTTTGGGTTGCTGGGGAGCATG
CTTTCTGAGCTGATAATCAATTGGACTATATATGCCAATAAGCTCACAGTTTTAGTGACT
CTTGTGGTCATCATTGTTATAAATCTGGCGGTCGGAATTCTCCCGCATGTTGACAACTTC
GCTCATATTGGAGGATTTATGTCTGGTTTTCTTCTTGGTTTCGTCTTTCTGATTCGGCCC
CAATTTGGTTGGGTGAGCCAGAGATATGCATCCAGTGCATATTCTTCAACATCAGCTAAA
CCTAAATTCAAGCTGTATCAGATGGTCCTATGGGTTATTTCTCTTATTCTTCTGATAATT
GGATTCACTGGCGGCTTGGTCATGCTTCTCCGTGGAGTAGATTTAAACGATCATTGTTCT
TGGTGCCACTATATGAGTTGCGTACCCACTTCAAGGTGGAGTTGCAACACAGAGCCTGTT
TCCTGTATGAACTTAGGTTGGGGATGTAAATTTGAACTTCATTTTCCGATTCGTTCTTGC
AGTCTGAGCAAACAGATAACCAGCTAA

Peptide Sequence

PEP ID

XP_016491494.1
PEP Infomation

PREDICTED: RHOMBOID-like protein 1 isoform X2 [Nicotiana tabacum]
Sequence

MAGSVPEIQIQVNSKKGGNSIHPVEPARTSAGGGPPVVYREIKHFKKWFPWLIPSFVIAN
VVTFLVTMYVNNCPHNSVSCVAGFLGRFSFQPFSENPLLGPSSNTLEKMGALDVNKVVHE
HEGWRLITCMWLHGGVFHLLANMLSLIVIGIRLEREFGFVRIGLLYIIAGLGGSLFSALF
IKSNISVGASGALFGLLGSMLSELIINWTIYANKLTVLVTLVVIIVINLAVGILPHVDNF
AHIGGFMSGFLLGFVFLIRPQFGWVSQRYASSAYSSTSAKPKFKLYQMVLWVISLILLII
GFTGGLVMLLRGVDLNDHCSWCHYMSCVPTSRWSCNTEPVSCMNLGWGCKFELHFPIRSC
SLSKQITS

Transcript Sequence

Gene sequence data has not been registered.